ttype patient gene classification type chr pos ref_allele newbase context65 cons46 BRCA BR-0036 PTPRF SNP Missense_Mutation 1 44083455 G A 38 100 CLL CLL_105 PTPRF SNP Missense_Mutation 1 44063535 G A 40 53 DLBCL DLBCL-MAYO_DLBCL_234 PTPRF SNP Silent 1 44069463 C T 23 43 ESO ESO-0149 PTPRF SNP Missense_Mutation 1 44086859 G A 40 99 ESO ESO-D76 PTPRF SNP Missense_Mutation 1 44070964 G A 40 100 HNSC HN_62506 PTPRF SNP Missense 1 44085375 A T 6 92 HNSC HN_62755 PTPRF SNP Splice_site 1 44086249 G T 39 100 LUAD LUAD-B00416 PTPRF SNP Silent 1 44085121 G T 38 42 LUAD LUAD-B01811 PTPRF SNP Missense_Mutation 1 44071065 G T 39 100 LUAD LUAD-S01345 PTPRF SNP Silent 1 44044488 G A 46 62 MEL ME014 PTPRF SNP Missense_Mutation 1 44056897 G A 37 78 MEL ME016 PTPRF SNP Silent 1 44064470 C T 30 54 MEL MEL-13447 PTPRF SNP Silent 1 44057586 G A 47 68 MEL MEL-13543 PTPRF SNP Missense_Mutation 1 44071034 G T 34 55 MEL MEL-JWCI-WGS-1 PTPRF SNP Missense_Mutation 1 44057168 C T 18 100 MEL MEL-JWCI-WGS-1 PTPRF SNP Silent 1 44058241 C T 22 53 MEL MEL-JWCI-WGS-1 PTPRF SNP Silent 1 44069688 C T 30 66 MEL MEL-JWCI-WGS-25 PTPRF SNP Silent 1 44083175 C T 21 53 MEL MEL-JWCI-WGS-39 PTPRF SNP Silent 1 44072634 C T 29 65 MEL MEL-JWCI-WGS-7 PTPRF DNP Splice_site 1 44083581 GG AA 39 100 MEL MEL-Ma-Mel-114 PTPRF SNP Silent 1 44085859 C T 31 54 MEL MEL-Ma-Mel-16 PTPRF SNP Missense_Mutation 1 44058153 C T 30 83 MEL MEL-Ma-Mel-65 PTPRF SNP Missense_Mutation 1 44069776 G A 37 83 MEL MEL-Ma-Mel-79 PTPRF SNP Missense_Mutation 1 44035381 C T 32 74 MM MM-0509 PTPRF SNP Missense_Mutation 1 44071950 C T 27 54 MM MM-0557 PTPRF SNP Missense_Mutation 1 44054495 C G 25 100 MM MM-0603 PTPRF SNP Missense_Mutation 1 44086787 G A 39 100 MM MM-0607 PTPRF SNP Missense_Mutation 1 44071959 C T 27 60 LUAD TCGA-05-4396 PTPRF SNP Missense_Mutation 1 44058257 C A 23 59 LUAD TCGA-17-Z051 PTPRF SNP Missense_Mutation 1 44069399 G T 39 96 GBM TCGA-19-2624 PTPRF SNP Missense_Mutation 1 44085120 C A 27 86 GBM TCGA-19-2625 PTPRF SNP Missense_Mutation 1 44056912 C T 19 78 LUSC TCGA-22-0944 PTPRF SNP Silent 1 44019608 C G 31 42 LUSC TCGA-22-4599 PTPRF SNP Silent 1 44069850 G T 39 28 LUSC TCGA-22-5491 PTPRF SNP Missense_Mutation 1 44070639 C G 30 99 OV TCGA-23-1124 PTPRF SNP Missense_Mutation 1 44069511 C G 18 75 OV TCGA-23-2079 PTPRF SNP Missense_Mutation 1 44085815 G C 37 100 OV TCGA-24-1552 PTPRF SNP Missense_Mutation 1 44044559 G A 40 99 OV TCGA-25-2404 PTPRF SNP Nonsense_Mutation 1 44075159 C G 18 68 GBM TCGA-27-2519 PTPRF SNP Missense_Mutation 1 44069848 C T 26 70 GBM TCGA-32-1977 PTPRF SNP Silent 1 44069550 G A 41 41 LUSC TCGA-33-4566 PTPRF SNP Missense_Mutation 1 44085828 G T 38 100 LUSC TCGA-37-3789 PTPRF SNP Missense_Mutation 1 44056897 G A 37 78 LUAD TCGA-44-2656 PTPRF SNP Missense_Mutation 1 44084819 G A 37 87 LUSC TCGA-46-3768 PTPRF SNP Silent 1 44071241 G T 43 65 LUAD TCGA-50-5072 PTPRF SNP Missense_Mutation 1 44069145 A C 16 87 LUAD TCGA-55-1596 PTPRF SNP Silent 1 44057085 G A 34 51 LUSC TCGA-60-2698 PTPRF SNP Missense_Mutation 1 44084309 T G 59 53 LUSC TCGA-63-5128 PTPRF SNP Silent 1 44070953 G T 46 61 LUSC TCGA-63-6202 PTPRF SNP Missense_Mutation 1 44056825 G A 39 100 LUSC TCGA-63-6202 PTPRF SNP Silent 1 44072012 G A 39 20 LUSC TCGA-66-2783 PTPRF SNP Silent 1 44056824 C T 27 38 LUSC TCGA-66-2792 PTPRF SNP Missense_Mutation 1 44084851 G T 35 100 LUAD TCGA-75-5147 PTPRF SNP Silent 1 44086229 G A 36 67 GBM TCGA-76-4928 PTPRF SNP Missense_Mutation 1 44084401 G A 38 100 GBM TCGA-76-6656 PTPRF SNP Splice_Site 1 44086251 G A 44 100 UCEC TCGA-A5-A0VQ PTPRF SNP Missense_Mutation 1 44085424 G A 39 100 UCEC TCGA-A5-A0VQ PTPRF SNP Splice_site 1 44086249 G A 39 100 BRCA TCGA-A8-A085 PTPRF SNP Missense_Mutation 1 44085063 G A 37 100 CRC TCGA-AA-3524 PTPRF SNP Missense_Mutation 1 44019168 C T 18 85 CRC TCGA-AA-3542 PTPRF SNP Missense_Mutation 1 44085361 G C 34 57 CRC TCGA-AA-3549 PTPRF SNP Missense_Mutation 1 44056664 A C 12 79 CRC TCGA-AA-3672 PTPRF SNP Missense_Mutation 1 44069663 G A 38 52 CRC TCGA-AA-3710 PTPRF SNP Missense_Mutation 1 44085358 C T 26 87 CRC TCGA-AA-3877 PTPRF SNP Missense_Mutation 1 44064425 G T 34 50 CRC TCGA-AA-3984 PTPRF SNP Silent 1 44044512 C T 23 39 CRC TCGA-AA-A00E PTPRF SNP Silent 1 44064521 G A 42 54 CRC TCGA-AA-A010 PTPRF SNP Missense_Mutation 1 44086156 G A 38 100 CRC TCGA-AA-A01Q PTPRF SNP Missense_Mutation 1 44019259 G A 38 77 CRC TCGA-AG-A002 PTPRF SNP Missense_Mutation 1 44019609 G A 37 83 UCEC TCGA-AP-A051 PTPRF SNP Missense_Mutation 1 44019259 G A 38 77 UCEC TCGA-AP-A051 PTPRF SNP Missense_Mutation 1 44071074 G A 37 54 UCEC TCGA-AP-A051 PTPRF SNP Missense_Mutation 1 44072584 G A 40 98 UCEC TCGA-AP-A051 PTPRF SNP Missense_Mutation 1 44086880 C T 27 71 UCEC TCGA-AP-A054 PTPRF SNP Missense_Mutation 1 44019487 A G 12 90 UCEC TCGA-AP-A056 PTPRF SNP Missense_Mutation 1 44083138 T C 62 93 UCEC TCGA-AP-A059 PTPRF SNP Silent 1 44019191 G A 35 52 UCEC TCGA-AP-A059 PTPRF SNP Silent 1 44057531 G T 35 100 UCEC TCGA-AP-A059 PTPRF SNP Silent 1 44069101 C T 27 47 UCEC TCGA-AP-A059 PTPRF SNP Missense_Mutation 1 44070882 G A 48 100 UCEC TCGA-AP-A059 PTPRF SNP Silent 1 44075093 G A 37 41 UCEC TCGA-AP-A0LM PTPRF SNP Missense_Mutation 1 44069407 G A 37 96 UCEC TCGA-AP-A0LT PTPRF SNP Silent 1 44054487 A G 7 44 UCEC TCGA-AX-A05Z PTPRF SNP Missense_Mutation 1 44085815 G A 37 100 UCEC TCGA-AX-A0J1 PTPRF SNP Missense_Mutation 1 44084747 G A 40 100 UCEC TCGA-AX-A0J1 PTPRF SNP Missense_Mutation 1 44086156 G A 38 100 KIRC TCGA-B0-4823 PTPRF SNP Missense_Mutation 1 44085866 C G 28 86 UCEC TCGA-B5-A0JR PTPRF SNP Missense_Mutation 1 44069858 A G 5 78 UCEC TCGA-B5-A0JY PTPRF SNP Missense_Mutation 1 44019259 G A 38 77 UCEC TCGA-B5-A11E PTPRF SNP Silent 1 44083189 C T 27 89 KIRC TCGA-B8-4622 PTPRF SNP Missense_Mutation 1 44070946 C G 31 100 HNSC TCGA-BA-5559 PTPRF SNP Silent 1 44044587 G A 46 46 HNSC TCGA-BA-6873 PTPRF SNP Silent 1 44069439 G A 35 58 UCEC TCGA-BG-A0M7 PTPRF SNP Splice_site 1 44086249 G A 39 100 BRCA TCGA-BH-A0HA PTPRF SNP Missense_Mutation 1 44069494 C T 23 59 BRCA TCGA-BH-A0HP PTPRF SNP Missense_Mutation 1 44079330 G A 41 100 BRCA TCGA-BH-A0HP PTPRF SNP Missense_Mutation 1 44087660 C A 21 100 BRCA TCGA-BH-A1EV PTPRF SNP Missense_Mutation 1 44035447 C T 29 99 UCEC TCGA-BK-A0C9 PTPRF SNP Silent 1 44069101 C T 27 47 UCEC TCGA-BK-A0C9 PTPRF SNP Missense_Mutation 1 44084388 A G 6 80 UCEC TCGA-BS-A0UJ PTPRF SNP Missense_Mutation 1 44054579 A G 11 93 KIRC TCGA-CJ-4873 PTPRF SNP Missense_Mutation 1 44057602 G C 33 71 KIRC TCGA-CJ-4875 PTPRF SNP Nonsense_Mutation 1 44086831 C T 19 46 HNSC TCGA-CN-4735 PTPRF SNP Missense_Mutation 1 44069435 G A 42 96 HNSC TCGA-CN-4736 PTPRF SNP Missense_Mutation 1 44075146 G A 39 85 HNSC TCGA-CN-5359 PTPRF SNP Splice_Site 1 44084958 G T 34 98 HNSC TCGA-CN-5364 PTPRF SNP Missense_Mutation 1 44058140 T C 56 65 HNSC TCGA-CR-7379 PTPRF SNP Missense_Mutation 1 44085815 G A 37 100 HNSC TCGA-CR-7380 PTPRF SNP Missense_Mutation 1 44085423 C T 23 86 HNSC TCGA-CV-7245 PTPRF SNP Missense_Mutation 1 44054597 G T 38 75 HNSC TCGA-CV-7245 PTPRF SNP Silent 1 44058190 C G 32 50 HNSC TCGA-CV-7245 PTPRF SNP Missense_Mutation 1 44058210 C T 25 98 HNSC TCGA-CV-7427 PTPRF SNP Silent 1 44069508 G A 33 63 HNSC TCGA-CV-7427 PTPRF SNP Missense_Mutation 1 44069632 G T 41 74 HNSC TCGA-CV-7427 PTPRF SNP Missense_Mutation 1 44069731 G C 33 74 UCEC TCGA-D1-A0ZS PTPRF SNP Missense_Mutation 1 44083455 G A 38 100 UCEC TCGA-D1-A101 PTPRF SNP Missense_Mutation 1 44069586 C A 18 67 UCEC TCGA-D1-A103 PTPRF SNP Silent 1 44058142 C T 31 60 UCEC TCGA-D1-A103 PTPRF SNP Missense_Mutation 1 44069680 G A 40 62 UCEC TCGA-D1-A103 PTPRF SNP Silent 1 44071037 G A 38 21 UCEC TCGA-D1-A103 PTPRF SNP Missense_Mutation 1 44072576 C T 19 80 UCEC TCGA-D1-A15X PTPRF SNP Silent 1 44084835 C T 25 57 UCEC TCGA-D1-A167 PTPRF SNP Missense_Mutation 1 44084400 C T 27 77 UCEC TCGA-D1-A176 PTPRF DEL In_Frame_Del 1 44086177 TTG - 64 92 BLCA TCGA-DK-A1AC PTPRF SNP Missense_Mutation 1 44019601 C T 29 83 BLCA TCGA-DK-A2HX PTPRF SNP Missense_Mutation 1 44071029 C T 29 58 BLCA TCGA-DK-A3IL PTPRF SNP Missense_Mutation 1 44086245 G T 46 87 BLCA TCGA-DK-A3IU PTPRF SNP Silent 1 44072610 C G 29 63 BRCA TCGA-E9-A1NG PTPRF SNP Silent 1 44063714 C T 23 48 HNSC TCGA-HL-7533 PTPRF SNP Missense_Mutation 1 44056897 G A 37 78