ttype patient gene classification type chr pos ref_allele newbase context65 cons46 DLBCL DLBCL-MAYO_DLBCL_234 ALK SNP Silent 2 29449825 G A 40 33 DLBCL DLBCL-MAYO_DLBCL_234 ALK SNP Missense_Mutation 2 29543727 T C 57 66 ESO ESO-0013 ALK SNP Missense_Mutation 2 29541214 T G 58 77 ESO ESO-1154 ALK SNP Missense_Mutation 2 29445420 A T 8 70 ESO ESO-117 ALK SNP Silent 2 29445413 G A 40 38 ESO ESO-120 ALK SNP Missense_Mutation 2 29462658 T G 56 58 ESO ESO-175 ALK SNP Missense_Mutation 2 29432685 A C 4 90 ESO ESO-838 ALK SNP Silent 2 29498089 G A 38 44 LUAD LUAD-74TBW ALK SNP Missense_Mutation 2 29917736 C A 19 46 LUAD LUAD-E00897 ALK SNP Missense_Mutation 2 29940490 C A 30 80 LUAD LUAD-F00089 ALK SNP Missense_Mutation 2 29917788 G T 43 53 LUAD LUAD-NYU201 ALK SNP Missense_Mutation 2 29498010 G A 44 49 LUAD LUAD-NYU315 ALK SNP Missense_Mutation 2 29940491 C G 21 80 LUAD LUAD-S01356 ALK SNP Silent 2 30143340 C G 27 47 MEL ME020 ALK SNP Missense_Mutation 2 29519902 G A 37 66 MEL MEL-JWCI-WGS-1 ALK SNP Missense_Mutation 2 29519902 G A 37 66 MEL MEL-Ma-Mel-114 ALK SNP Missense_Mutation 2 29430119 C T 22 100 MEL MEL-Ma-Mel-119 ALK SNP Missense_Mutation 2 29451835 C T 29 71 MEL MEL-Ma-Mel-79 ALK SNP Missense_Mutation 2 29456465 C T 30 94 MM MM-0512 ALK SNP Missense_Mutation 2 29445418 G A 42 96 MM MM-0553 ALK SNP Silent 2 29754894 C T 21 61 NB NB-0419 ALK SNP Missense_Mutation 2 29445213 A T 12 92 NB NB-0462 ALK SNP Missense_Mutation 2 29443695 G T 45 87 NB NB-1155 ALK SNP Missense_Mutation 2 29432664 C T 31 98 NB NB-1659 ALK SNP Missense_Mutation 2 29432664 C T 31 98 NB NB-1956 ALK SNP Missense_Mutation 2 29443695 G T 45 87 NB NB-3270 ALK SNP Missense_Mutation 2 29436860 A T 3 92 LUAD TCGA-05-4382 ALK SNP Silent 2 29416585 G T 47 41 LUAD TCGA-05-4382 ALK SNP Missense_Mutation 2 29754890 C A 19 79 LUAD TCGA-05-4396 ALK SNP Silent 2 29416300 C A 23 38 LUAD TCGA-05-4396 ALK SNP Missense_Mutation 2 29450451 G T 47 76 LUAD TCGA-05-4396 ALK SNP Splice_Site 2 29917881 C A 24 79 LUAD TCGA-05-4397 ALK SNP Missense_Mutation 2 30143288 G T 34 54 LUAD TCGA-05-4398 ALK SNP Missense_Mutation 2 29497970 G T 35 76 LUAD TCGA-05-4410 ALK SNP Missense_Mutation 2 29446262 G A 44 69 LUAD TCGA-05-4410 ALK SNP Silent 2 29519836 T G 55 49 LUAD TCGA-05-4427 ALK SNP Silent 2 30143133 G A 39 47 LUAD TCGA-05-4432 ALK DNP Splice_Site 2 29917880 CC AT 18 79 OV TCGA-13-0730 ALK SNP Missense_Mutation 2 29416770 T A 59 77 GBM TCGA-15-1444 ALK SNP Missense_Mutation 2 29917797 G A 38 79 LUAD TCGA-17-Z001 ALK SNP Missense_Mutation 2 29474042 G T 38 52 LUAD TCGA-17-Z025 ALK SNP Nonsense_Mutation 2 29917779 C A 30 79 LUAD TCGA-17-Z026 ALK SNP Silent 2 29448340 G T 39 33 LUAD TCGA-17-Z030 ALK SNP Silent 2 29754879 G A 48 57 LUAD TCGA-17-Z031 ALK SNP Silent 2 29455249 G T 47 82 LUAD TCGA-17-Z031 ALK SNP Missense_Mutation 2 29551311 G C 41 64 LUAD TCGA-17-Z036 ALK SNP Missense_Mutation 2 29541192 G C 39 82 LUAD TCGA-17-Z043 ALK DNP Missense_Mutation 2 29940451 GC AA 42 41 LUAD TCGA-17-Z056 ALK SNP Silent 2 29451871 C T 24 60 LUAD TCGA-17-Z060 ALK SNP Silent 2 29940508 A G 13 54 LUSC TCGA-18-3409 ALK SNP Missense_Mutation 2 29416491 C T 30 76 LUSC TCGA-18-4086 ALK SNP Missense_Mutation 2 29456502 G C 39 67 LUSC TCGA-22-4599 ALK SNP Silent 2 29754882 C A 25 54 LUSC TCGA-22-4613 ALK SNP Missense_Mutation 2 29446232 G T 39 98 LUSC TCGA-22-5474 ALK SNP Silent 2 29917801 G A 35 51 OV TCGA-24-1427 ALK SNP Missense_Mutation 2 29940556 G T 34 51 OV TCGA-24-2267 ALK SNP Missense_Mutation 2 30143334 G T 41 54 OV TCGA-25-1313 ALK SNP Silent 2 29446231 C T 27 1 GBM TCGA-32-4211 ALK SNP Splice_site 2 29443572 C T 23 58 LUAD TCGA-38-4626 ALK SNP Missense_Mutation 2 29551252 C A 30 64 LUSC TCGA-39-5022 ALK SNP Missense_Mutation 2 29416544 G A 42 75 LUAD TCGA-44-2656 ALK SNP Missense_Mutation 2 29551271 C A 24 56 LUAD TCGA-44-4112 ALK SNP Missense_Mutation 2 29551229 C A 32 54 LUAD TCGA-44-6776 ALK SNP Missense_Mutation 2 29455189 G T 40 51 LUAD TCGA-44-6777 ALK SNP Missense_Mutation 2 29551314 C A 28 76 LUAD TCGA-49-6767 ALK SNP Silent 2 29498008 G C 39 50 LUAD TCGA-49-6767 ALK SNP Silent 2 29498359 G A 33 64 LUAD TCGA-50-5930 ALK SNP Missense_Mutation 2 29416683 G T 33 66 LUAD TCGA-50-5930 ALK SNP Missense_Mutation 2 29462643 C A 23 81 LUAD TCGA-50-5930 ALK SNP Missense_Mutation 2 29519873 C A 21 78 LUAD TCGA-50-5946 ALK SNP Nonsense_Mutation 2 29754815 C A 32 67 LUAD TCGA-55-1592 ALK SNP Missense_Mutation 2 29519878 A G 10 73 LUAD TCGA-64-1677 ALK SNP Silent 2 29498008 G T 39 50 LUAD TCGA-64-1678 ALK SNP Missense_Mutation 2 30143102 C A 18 80 LUAD TCGA-64-5781 ALK SNP Missense_Mutation 2 29416528 G T 40 56 LUAD TCGA-64-5781 ALK SNP Silent 2 29450489 C A 22 50 LUAD TCGA-64-5781 ALK SNP Silent 2 29917834 A T 11 43 LUSC TCGA-66-2742 ALK SNP Missense_Mutation 2 29917817 C T 24 79 LUAD TCGA-75-6207 ALK SNP Silent 2 29456482 A G 8 45 LUAD TCGA-91-6829 ALK SNP Silent 2 29551274 C G 26 36 LUAD TCGA-91-6831 ALK SNP Silent 2 29551313 G A 34 42 LUAD TCGA-91-6836 ALK SNP Missense_Mutation 2 29420529 G T 34 56 LUAD TCGA-91-6836 ALK SNP Silent 2 29519816 G T 39 52 BRCA TCGA-A2-A0T0 ALK DEL In_Frame_Del 2 29432670 ATCCCG - 8 90 UCEC TCGA-A5-A0R6 ALK SNP Nonsense_Mutation 2 29498334 C A 22 75 CRC TCGA-A6-2676 ALK SNP Splice_site 2 29917879 A G 10 54 CRC TCGA-AA-3514 ALK SNP Silent 2 29443698 T C 52 63 CRC TCGA-AA-3518 ALK SNP Missense_Mutation 2 29430046 G T 48 98 CRC TCGA-AA-3554 ALK SNP Silent 2 29455174 G A 39 52 CRC TCGA-AA-3562 ALK SNP Nonsense_Mutation 2 29498049 T A 56 72 CRC TCGA-AA-3710 ALK SNP Missense_Mutation 2 29451871 C A 24 60 CRC TCGA-AA-3715 ALK SNP Missense_Mutation 2 29551323 G A 42 76 CRC TCGA-AA-3818 ALK SNP Missense_Mutation 2 29497989 G T 48 57 CRC TCGA-AA-3845 ALK SNP Splice_site 2 29541170 C A 24 82 CRC TCGA-AA-3864 ALK SNP Silent 2 29606701 G A 37 52 CRC TCGA-AA-3947 ALK SNP Silent 2 29462663 G A 38 50 CRC TCGA-AA-3976 ALK SNP Missense_Mutation 2 29606700 C T 23 82 CRC TCGA-AA-3977 ALK SNP Missense_Mutation 2 29606618 G A 42 70 CRC TCGA-AA-3984 ALK SNP Silent 2 29519819 G A 37 34 CRC TCGA-AA-A00N ALK SNP Missense_Mutation 2 29416634 G A 42 62 CRC TCGA-AA-A01R ALK SNP Nonsense_Mutation 2 29606679 G A 37 82 AML TCGA-AB-2808 ALK SNP Missense_Mutation 2 29917847 A G 7 75 AML TCGA-AB-2863 ALK SNP Missense_Mutation 2 29940537 T A 64 50 CRC TCGA-AG-3609 ALK SNP Silent 2 29450510 G T 39 40 CRC TCGA-AG-3609 ALK SNP Missense_Mutation 2 29519818 C T 27 60 CRC TCGA-AG-A002 ALK SNP Silent 2 29416201 G A 40 50 CRC TCGA-AG-A002 ALK SNP Missense_Mutation 2 29543728 A C 13 77 CRC TCGA-AG-A002 ALK SNP Silent 2 29606605 G A 46 70 CRC TCGA-AG-A002 ALK SNP Nonsense_Mutation 2 29606679 G A 37 82 BRCA TCGA-AN-A04A ALK SNP Silent 2 29416321 G A 40 50 UCEC TCGA-AP-A051 ALK SNP Silent 2 29416201 G A 40 50 UCEC TCGA-AP-A051 ALK SNP Silent 2 29420416 A G 7 16 UCEC TCGA-AP-A051 ALK SNP Silent 2 29455240 G A 48 50 UCEC TCGA-AP-A051 ALK SNP Missense_Mutation 2 30142942 G A 38 60 UCEC TCGA-AP-A051 ALK SNP Silent 2 30143385 C T 27 43 UCEC TCGA-AP-A059 ALK SNP Missense_Mutation 2 29416607 G T 33 78 UCEC TCGA-AP-A059 ALK SNP Missense_Mutation 2 29940532 C T 25 44 UCEC TCGA-AP-A05N ALK SNP Missense_Mutation 2 29449904 T C 49 74 UCEC TCGA-AP-A0LD ALK SNP Missense_Mutation 2 29416281 C G 32 100 UCEC TCGA-AP-A0LM ALK SNP Splice_site 2 29446209 G A 37 70 UCEC TCGA-AP-A0LM ALK SNP Missense_Mutation 2 29446229 C T 23 98 UCEC TCGA-AP-A0LM ALK SNP Silent 2 29455189 G A 40 51 UCEC TCGA-AP-A0LM ALK SNP Missense_Mutation 2 29606702 A C 12 77 UCEC TCGA-AP-A0LT ALK SNP Missense_Mutation 2 29606606 C T 25 82 UCEC TCGA-AX-A05Z ALK SNP Missense_Mutation 2 29473997 C A 30 99 UCEC TCGA-AX-A060 ALK SNP Missense_Mutation 2 29462665 C A 24 79 UCEC TCGA-AX-A0J0 ALK SNP Silent 2 29462672 G A 38 43 KIRC TCGA-B0-4703 ALK SNP Missense_Mutation 2 29443697 A G 4 93 KIRC TCGA-B0-5694 ALK SNP Missense_Mutation 2 29917822 G C 44 49 UCEC TCGA-B5-A0JY ALK SNP Missense_Mutation 2 29430052 G T 33 86 UCEC TCGA-B5-A0JY ALK SNP Silent 2 29432705 G A 42 41 UCEC TCGA-B5-A0JY ALK SNP Missense_Mutation 2 29543705 G T 33 63 UCEC TCGA-B5-A0K2 ALK SNP Splice_site 2 29432652 C A 24 98 UCEC TCGA-B5-A11E ALK SNP Silent 2 29462582 G T 41 69 UCEC TCGA-B5-A11H ALK SNP Missense_Mutation 2 29416647 G A 38 67 KIRC TCGA-B8-5163 ALK SNP Missense_Mutation 2 29420425 C G 32 69 UCEC TCGA-BG-A18B ALK SNP Silent 2 29456458 T C 54 25 BRCA TCGA-BH-A0E0 ALK SNP Nonsense_Mutation 2 29432665 G A 39 74 BRCA TCGA-BH-A0E1 ALK SNP Silent 2 29917810 C T 32 61 KIRC TCGA-BP-4789 ALK SNP Missense_Mutation 2 29450494 C T 32 68 UCEC TCGA-BS-A0TA ALK SNP Missense_Mutation 2 30142885 C T 27 94 UCEC TCGA-BS-A0TA ALK SNP Missense_Mutation 2 30142909 G A 38 66 UCEC TCGA-BS-A0UF ALK SNP Silent 2 29432675 G A 37 48 UCEC TCGA-BS-A0UV ALK SNP Missense_Mutation 2 29455225 C A 32 57 UCEC TCGA-BS-A0UV ALK SNP Silent 2 29456524 G A 48 54 UCEC TCGA-BS-A0UV ALK SNP Missense_Mutation 2 29606657 G T 41 82 KIRC TCGA-CJ-5682 ALK SNP Missense_Mutation 2 29455209 A G 11 60 HNSC TCGA-CN-5370 ALK SNP Missense_Mutation 2 29462560 C T 30 99 HNSC TCGA-CN-6023 ALK SNP Silent 2 29456500 A T 6 44 HNSC TCGA-CQ-6220 ALK SNP Missense_Mutation 2 29474101 C T 23 99 HNSC TCGA-CQ-6221 ALK SNP Nonsense_Mutation 2 30143411 G A 46 73 HNSC TCGA-CR-7373 ALK SNP Missense_Mutation 2 29443686 C G 32 66 HNSC TCGA-CR-7390 ALK SNP Missense_Mutation 2 29606696 C T 19 58 HNSC TCGA-CV-5441 ALK SNP Missense_Mutation 2 29519791 G T 46 78 HNSC TCGA-CV-7100 ALK DEL Frame_Shift_Del 2 29451771 CA - 21 97 KIRC TCGA-CW-5589 ALK DEL Frame_Shift_Del 2 29462601 T - 56 77 HNSC TCGA-CX-7082 ALK SNP Missense_Mutation 2 29456487 C A 19 76 UCEC TCGA-D1-A103 ALK SNP Missense_Mutation 2 30142872 C A 32 59 UCEC TCGA-D1-A16D ALK SNP Splice_Site 2 29551215 C T 19 75 UCEC TCGA-D1-A17Q ALK SNP Missense_Mutation 2 29455216 C A 32 47 UCEC TCGA-D1-A17Q ALK SNP Silent 2 29551310 G T 35 76 BLCA TCGA-DK-A2I2 ALK SNP Missense_Mutation 2 29917721 G C 43 66 HNSC TCGA-DQ-7591 ALK SNP Missense_Mutation 2 29455179 C T 23 82 BRCA TCGA-E2-A1BD ALK SNP Missense_Mutation 2 29455275 C T 23 96 BLCA TCGA-G2-A2EO ALK SNP Silent 2 29519819 G A 37 34